Publications

103 entries « 2 of 3 »

2009

Elam, Marshall B; Cowan, George S; Rooney, Robert J; Hiler, M Lloyd; Yellaturu, Chandrahasa R; Deng, Xiong; Howell, George E; Park, Edwards A; Gerling, Ivan C; Patel, Divyan; Corton, J Christopher; Cagen, Lauren M; Wilcox, Henry G; Gandhi, Malay; Bahr, Micheal H; Allan, Micheal C; Wodi, Linus A; Cook, George A; Hughes, Thomas A; Raghow, Rajendra

Hepatic gene expression in morbidly obese women: implications for disease susceptibility Journal Article

In: Obesity (Silver Spring), vol. 17, no. 8, pp. 1563–1573, 2009, ISSN: 1930-7381.

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Lavery, Karen; Hawley, Sara; Swain, Pamela; Rooney, Robert; Falb, Dean; Alaoui-Ismaili, Moulay Hicham

New insights into BMP-7 mediated osteoblastic differentiation of primary human mesenchymal stem cells Journal Article

In: Bone, vol. 45, no. 1, pp. 27–41, 2009, ISSN: 1873-2763.

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Park, Sang-Kyu; Tedesco, Patricia M; Johnson, Thomas E

Oxidative stress and longevity in Caenorhabditis elegans as mediated by SKN-1 Journal Article

In: Aging Cell, vol. 8, no. 3, pp. 258–269, 2009, ISSN: 1474-9726.

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2008

Zhang, Yuexing; Lu, Yan; Zhou, Hua; Lee, Myounghee; Liu, Zhenqiu; Hassel, Bret A; Hamburger, Anne W

Alterations in cell growth and signaling in ErbB3 binding protein-1 (Ebp1) deficient mice Journal Article

In: BMC Cell Biol, vol. 9, pp. 69, 2008, ISSN: 1471-2121.

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Zhang, Yuexing; Linn, Douglas; Liu, Zhenqiu; Melamed, Jonathan; Tavora, Fabio; Young, Charles Y; Burger, Angelika M; Hamburger, Anne W

EBP1, an ErbB3-binding protein, is decreased in prostate cancer and implicated in hormone resistance Journal Article

In: Mol Cancer Ther, vol. 7, no. 10, pp. 3176–3186, 2008, ISSN: 1535-7163.

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Davis, Angela M; Mao, Jiude; Naz, Bushra; Kohl, Jessica A; Rosenfeld, Cheryl S

Comparative effects of estradiol, methyl-piperidino-pyrazole, raloxifene, and ICI 182 780 on gene expression in the murine uterus Journal Article

In: J Mol Endocrinol, vol. 41, no. 4, pp. 205–217, 2008, ISSN: 1479-6813.

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Lu, Lu; Wei, Lai; Peirce, Jeremy L; Wang, Xusheng; Zhou, Jianhua; Homayouni, Ramin; Williams, Robert W; Airey, David C

Using gene expression databases for classical trait QTL candidate gene discovery in the BXD recombinant inbred genetic reference population: mouse forebrain weight Journal Article

In: BMC Genomics, vol. 9, pp. 444, 2008, ISSN: 1471-2164.

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Barker, Katherine S; Park, Hyunsook; Phan, Quynh T; Xu, Lijing; Homayouni, Ramin; Rogers, P David; Filler, Scott G

Transcriptome profile of the vascular endothelial cell response to Candida albicans Journal Article

In: J Infect Dis, vol. 198, no. 2, pp. 193–202, 2008, ISSN: 0022-1899.

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Dunkel, Nico; Liu, Teresa T; Barker, Katherine S; Homayouni, Ramin; Morschhäuser, Joachim; Rogers, P David

A gain-of-function mutation in the transcription factor Upc2p causes upregulation of ergosterol biosynthesis genes and increased fluconazole resistance in a clinical Candida albicans isolate Journal Article

In: Eukaryot Cell, vol. 7, no. 7, pp. 1180–1190, 2008, ISSN: 1535-9786.

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Kerkhoven, Ron M; Sie, Daoud; Nieuwland, Marja; Heimerikx, Mike; Ronde, Jorma De; Brugman, Wim; Velds, Arno

The T7-primer is a source of experimental bias and introduces variability between microarray platforms Journal Article

In: PLoS One, vol. 3, no. 4, pp. e1980, 2008, ISSN: 1932-6203.

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2007

Parada-Bustamante, Alexis; Orihuela, Pedro A; Ríos, Mariana; Navarrete-Gómez, Patricia A; Cuevas, Catherina A; Velasquez, Luis A; Villalón, Manuel J; Croxatto, Horacio B

Catechol-o-methyltransferase and methoxyestradiols participate in the intraoviductal nongenomic pathway through which estradiol accelerates egg transport in cycling rats Journal Article

In: Biol Reprod, vol. 77, no. 6, pp. 934–941, 2007, ISSN: 0006-3363.

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Liu, Teresa T; Znaidi, Sadri; Barker, Katherine S; Xu, Lijing; Homayouni, Ramin; Saidane, Saloua; Morschhäuser, Joachim; Nantel, André; Raymond, Martine; Rogers, P David

Genome-wide expression and location analyses of the Candida albicans Tac1p regulon Journal Article

In: Eukaryot Cell, vol. 6, no. 11, pp. 2122–2138, 2007, ISSN: 1535-9778.

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Lanford, Robert E; Guerra, Bernadette; Bigger, Catherine B; Lee, Helen; Chavez, Deborah; Brasky, Kathleen M

Lack of response to exogenous interferon-alpha in the liver of chimpanzees chronically infected with hepatitis C virus Journal Article

In: Hepatology, vol. 46, no. 4, pp. 999–1008, 2007, ISSN: 0270-9139.

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Buckley, Michael T; Yoon, Joanne; Yee, Herman; Chiriboga, Luis; Liebes, Leonard; Ara, Gulshan; Qian, Xiaozhong; Bajorin, Dean F; Sun, Tung-Tien; Wu, Xue-Ru; Osman, Iman

The histone deacetylase inhibitor belinostat (PXD101) suppresses bladder cancer cell growth in vitro and in vivo Journal Article

In: J Transl Med, vol. 5, pp. 49, 2007, ISSN: 1479-5876.

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Bowen, Lizabeth; Riva, Federica; Mohr, Chuck; Aldridge, Brian; Schwartz, Julie; Miles, A. Keith; Stott, Jeffrey L.

Differential Gene Expression Induced by Exposure of Captive Mink to Fuel Oil: A Model for the Sea Otter Journal Article

In: EcoHealth, vol. 4, no. 3, pp. 298-309, 2007, ISSN: 1612-9210.

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Rodrigues, S; Wever, O De; Bruyneel, E; Rooney, R J; Gespach, C

Opposing roles of netrin-1 and the dependence receptor DCC in cancer cell invasion, tumor growth and metastasis Journal Article

In: Oncogene, vol. 26, no. 38, pp. 5615–5625, 2007, ISSN: 0950-9232.

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Swartz-Basile, Deborah A; Lu, Debao; Basile, David P; Graewin, Shannon J; Al-Azzawi, Hayder; Kiely, James M; Mathur, Abhishek; Yancey, Kyle; Pitt, Henry A

Leptin regulates gallbladder genes related to absorption and secretion Journal Article

In: Am J Physiol Gastrointest Liver Physiol, vol. 293, no. 1, pp. G84–G90, 2007, ISSN: 0193-1857.

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McBride, Shonna M; Fischetti, Vincent A; Leblanc, Donald J; Moellering, Robert C; Gilmore, Michael S

Genetic diversity among Enterococcus faecalis Journal Article

In: PLoS One, vol. 2, no. 7, pp. e582, 2007, ISSN: 1932-6203.

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Cvetanovic, Marija; Rooney, Robert J; Garcia, Jesus J; Toporovskaya, Nataliya; Zoghbi, Huda Y; Opal, Puneet

The role of LANP and ataxin 1 in E4F-mediated transcriptional repression Journal Article

In: EMBO Rep, vol. 8, no. 7, pp. 671–677, 2007, ISSN: 1469-221X.

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Kothapalli, Kumar S D; Anthony, Joshua C; Pan, Bruce S; Hsieh, Andrea T; Nathanielsz, Peter W; Brenna, J Thomas

Differential cerebral cortex transcriptomes of baboon neonates consuming moderate and high docosahexaenoic acid formulas Journal Article

In: PLoS One, vol. 2, no. 4, pp. e370, 2007, ISSN: 1932-6203.

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Nijland, Mark J; Schlabritz-Loutsevitch, Natalia E; Hubbard, Gene B; Nathanielsz, Peter W; Cox, Laura A

Non-human primate fetal kidney transcriptome analysis indicates mammalian target of rapamycin (mTOR) is a central nutrient-responsive pathway Journal Article

In: J Physiol, vol. 579, no. Pt 3, pp. 643–656, 2007, ISSN: 0022-3751.

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Mo, Lan; Zheng, Xiaoyong; Huang, Hong-Ying; Shapiro, Ellen; Lepor, Herbert; Cordon-Cardo, Carlos; Sun, Tung-Tien; Wu, Xue-Ru

Hyperactivation of Ha-ras oncogene, but not Ink4a/Arf deficiency, triggers bladder tumorigenesis Journal Article

In: J Clin Invest, vol. 117, no. 2, pp. 314–325, 2007, ISSN: 0021-9738.

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2006

Han, Junhai; Gong, Ping; Reddig, Keith; Mitra, Mirna; Guo, Peiyi; Li, Hong-Sheng

The fly CAMTA transcription factor potentiates deactivation of rhodopsin, a G protein-coupled light receptor Journal Article

In: Cell, vol. 127, no. 4, pp. 847–858, 2006, ISSN: 0092-8674.

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Komatsu, Koga; Buchanan, F Gregory; Otaka, Michiro; Jin, Mario; Odashima, Masaru; Horikawa, Yohei; Watanabe, Sumio; Dubois, Raymond N

Gene expression profiling following constitutive activation of MEK1 and transformation of rat intestinal epithelial cells Journal Article

In: Mol Cancer, vol. 5, pp. 63, 2006, ISSN: 1476-4598.

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Walker, Stephen J; Segal, Jeffrey; Aschner, Michael

Cultured lymphocytes from autistic children and non-autistic siblings up-regulate heat shock protein RNA in response to thimerosal challenge Journal Article

In: Neurotoxicology, vol. 27, no. 5, pp. 685–692, 2006, ISSN: 0161-813X.

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Dimcheff, Derek E; Volkert, L Gwenn; Li, Ying; DeLucia, Angelo L; Lynch, William P

Gene expression profiling of microglia infected by a highly neurovirulent murine leukemia virus: implications for neuropathogenesis Journal Article

In: Retrovirology, vol. 3, pp. 26, 2006, ISSN: 1742-4690.

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Cox, Laura A; Schlabritz-Loutsevitch, Natalia; Hubbard, Gene B; Nijland, Mark J; McDonald, Thomas J; Nathanielsz, Peter W

Gene expression profile differences in left and right liver lobes from mid-gestation fetal baboons: a cautionary tale Journal Article

In: J Physiol, vol. 572, no. Pt 1, pp. 59–66, 2006, ISSN: 0022-3751.

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Cox, L A; Nijland, M J; Gilbert, J S; Schlabritz-Loutsevitch, N E; Hubbard, G B; McDonald, T J; Shade, R E; Nathanielsz, P W

Effect of 30 per cent maternal nutrient restriction from 0.16 to 0.5 gestation on fetal baboon kidney gene expression Journal Article

In: J Physiol, vol. 572, no. Pt 1, pp. 67–85, 2006, ISSN: 0022-3751.

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Wei, Lai; Sandbulte, Matthew R; Thomas, Paul G; Webby, Richard J; Homayouni, Ramin; Pfeffer, Lawrence M

NFkappaB negatively regulates interferon-induced gene expression and anti-influenza activity Journal Article

In: J Biol Chem, vol. 281, no. 17, pp. 11678–11684, 2006, ISSN: 0021-9258.

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Ge, Yubin; Dombkowski, Alan A; LaFiura, Katherine M; Tatman, Dana; Yedidi, Ravikiran S; Stout, Mark L; Buck, Steven A; Massey, Gita; Becton, David L; Weinstein, Howard J; Ravindranath, Yaddanapudi; Matherly, Larry H; Taub, Jeffrey W

Differential gene expression, GATA1 target genes, and the chemotherapy sensitivity of Down syndrome megakaryocytic leukemia Journal Article

In: Blood, vol. 107, no. 4, pp. 1570–1581, 2006, ISSN: 0006-4971.

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2005

Sharma, Rajesh K; Orr, William E; Schmitt, Allyson D; Johnson, Dianna A

A functional profile of gene expression in ARPE-19 cells Journal Article

In: BMC Ophthalmol, vol. 5, pp. 25, 2005, ISSN: 1471-2415.

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Korem, Moshe; Gov, Yael; Kiran, Madanahally D; Balaban, Naomi

Transcriptional profiling of target of RNAIII-activating protein, a master regulator of staphylococcal virulence Journal Article

In: Infect Immun, vol. 73, no. 10, pp. 6220–6228, 2005, ISSN: 0019-9567.

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Zhang, Yuexing; Wang, Xin-Wei; Jelovac, Danijela; Nakanishi, Takeo; Yu, Myoung-Hee; Akinmade, Damilola; Goloubeva, Olga; Ross, Douglas D; Brodie, Angela; Hamburger, Anne W

The ErbB3-binding protein Ebp1 suppresses androgen receptor-mediated gene transcription and tumorigenesis of prostate cancer cells Journal Article

In: Proc Natl Acad Sci U S A, vol. 102, no. 28, pp. 9890–9895, 2005, ISSN: 0027-8424.

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Baerson, Scott R; Sánchez-Moreiras, Adela; Pedrol-Bonjoch, Nuria; Schulz, Margot; Kagan, Isabelle A; Agarwal, Ameeta K; Reigosa, Manuel J; Duke, Stephen O

Detoxification and transcriptome response in Arabidopsis seedlings exposed to the allelochemical benzoxazolin-2(3H)-one Journal Article

In: J Biol Chem, vol. 280, no. 23, pp. 21867–21881, 2005, ISSN: 0021-9258.

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Hawse, John R; DeAmicis-Tress, Candida; Cowell, Tracy L; Kantorow, Marc

Identification of global gene expression differences between human lens epithelial and cortical fiber cells reveals specific genes and their associated pathways important for specialized lens cell functions Journal Article

In: Mol Vis, vol. 11, pp. 274–283, 2005, ISSN: 1090-0535.

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Chesler, Elissa J; Lu, Lu; Shou, Siming; Qu, Yanhua; Gu, Jing; Wang, Jintao; Hsu, Hui Chen; Mountz, John D; Baldwin, Nicole E; Langston, Michael A; Threadgill, David W; Manly, Kenneth F; Williams, Robert W

Complex trait analysis of gene expression uncovers polygenic and pleiotropic networks that modulate nervous system function Journal Article

In: Nat Genet, vol. 37, no. 3, pp. 233–242, 2005, ISSN: 1061-4036.

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2004

Deng, Xiong; Elam, Marshall B; Wilcox, Henry G; Cagen, Lauren M; Park, Edwards A; Raghow, Rajendra; Patel, Divyen; Kumar, Poonam; Sheybani, Ali; Russell, James C

Dietary olive oil and menhaden oil mitigate induction of lipogenesis in hyperinsulinemic corpulent JCR:LA-cp rats: microarray analysis of lipid-related gene expression Journal Article

In: Endocrinology, vol. 145, no. 12, pp. 5847–5861, 2004, ISSN: 0013-7227.

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Vázquez-Chona, Félix; Song, Bong K; Geisert, Eldon E

Temporal changes in gene expression after injury in the rat retina Journal Article

In: Invest Ophthalmol Vis Sci, vol. 45, no. 8, pp. 2737–2746, 2004, ISSN: 0146-0404.

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Jablonski, Monica M; Lu, Lu; Wang, XiaoFei; Chesler, Elissa J; Carps, Emily; Qi, Shuhua; Gu, Jing; Williams, Robert W

The ldis1 lens mutation in RIIIS/J mice maps to chromosome 8 near cadherin 1 Journal Article

In: Mol Vis, vol. 10, pp. 577–587, 2004, ISSN: 1090-0535.

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Nichols, Charles D; Sanders-Bush, Elaine

Molecular genetic responses to lysergic acid diethylamide include transcriptional activation of MAP kinase phosphatase-1, C/EBP-beta and ILAD-1, a novel gene with homology to arrestins Journal Article

In: J Neurochem, vol. 90, no. 3, pp. 576–584, 2004, ISSN: 0022-3042.

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Pfeffer, Lawrence M; Kim, Jong-Gwan; Pfeffer, Susan R; Carrigan, Dennis J; Baker, Darren P; Wei, Lai; Homayouni, Ramin

Role of nuclear factor-kappaB in the antiviral action of interferon and interferon-regulated gene expression Journal Article

In: J Biol Chem, vol. 279, no. 30, pp. 31304–31311, 2004, ISSN: 0021-9258.

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Liu, Xueqiao; Wulf, Peter De

Probing the ArcA-P modulon of Escherichia coli by whole genome transcriptional analysis and sequence recognition profiling Journal Article

In: J Biol Chem, vol. 279, no. 13, pp. 12588–12597, 2004, ISSN: 0021-9258.

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2003

Rogojina, Anna T; Orr, William E; Song, Bong K; Geisert, Eldon E

Comparing the use of Affymetrix to spotted oligonucleotide microarrays using two retinal pigment epithelium cell lines Journal Article

In: Mol Vis, vol. 9, pp. 482–496, 2003, ISSN: 1090-0535.

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Hawse, John R; Hejtmancik, James F; Huang, Quingling; Sheets, Nancy L; Hosack, Douglas A; Lempicki, Richard A; Horwitz, Joseph; Kantorow, Marc

Identification and functional clustering of global gene expression differences between human age-related cataract and clear lenses Journal Article

In: Mol Vis, vol. 9, pp. 515–537, 2003, ISSN: 1090-0535.

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Agarwal, Ameeta K; Rogers, P David; Baerson, Scott R; Jacob, Melissa R; Barker, Katherine S; Cleary, John D; Walker, Larry A; Nagle, Dale G; Clark, Alice M

Genome-wide expression profiling of the response to polyene, pyrimidine, azole, and echinocandin antifungal agents in Saccharomyces cerevisiae Journal Article

In: J Biol Chem, vol. 278, no. 37, pp. 34998–35015, 2003, ISSN: 0021-9258.

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Gerling, Ivan C; Sun, Yao; Ahokas, Robert A; Wodi, Linus A; Bhattacharya, Syamal K; Warrington, Kenneth J; Postlethwaite, Arnold E; Weber, Karl T

Aldosteronism: an immunostimulatory state precedes proinflammatory/fibrogenic cardiac phenotype Journal Article

In: Am J Physiol Heart Circ Physiol, vol. 285, no. 2, pp. H813–H821, 2003, ISSN: 0363-6135.

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David Peters Paul Hergenroeder, Dan Handley

Towards A Genetic Signature of Lymph Node Positive Breast Cancer Journal Article

In: 2003.

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Barker, Katherine S; Pearson, Margaret M; Rogers, P David

Identification of genes differentially expressed in association with reduced azole susceptibility in Saccharomyces cerevisiae Journal Article

In: J Antimicrob Chemother, vol. 51, no. 5, pp. 1131–1140, 2003, ISSN: 0305-7453.

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Mahadeo A. Sukhai Rashmi S. Goswami, Mariam Thomas

Use of Microarray Technology for Determining Gene Expression Signatures for Different Disease States: Journal Article

In: 2003.

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2002

Airey, David C; Lu, Lu; Shou, Siming; Williams, Robert W

Genetic sources of individual differences in the cerebellum Journal Article

In: Cerebellum, vol. 1, no. 4, pp. 233–240, 2002, ISSN: 1473-4222.

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103 entries « 2 of 3 »