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Bioinformatics

Bioinformatics

Bioinformatics is constantly evolving and growing, and so should your solutions

Genome Explorations is proud to offer some of the most comprehensive bioinformatics solutions out there. From genomic/epigenomic, to transcriptomics and custom solutions, we have solutions to tackle any bioinformatic problems.

Genomic/Epigenomic

  • Single Nucleotide Variants (SNV)
  • Insertions and Deletions (INDELS)
  • Copy Number Variants (CNV)
  • Structural Variants (SV)
  • Differential Gene Expression
  • Alignment
  • Microarray Analysis
  • SNP Genotyping
  • miRNA Expression Analysis
  • DNA Methylation Analysis
  • Reduced Representation Bisulfite/Whole-Genome Bisulfite Sequencing
  • ChIP-Seq
  • ATAC-Seq
  • Metagenomics
  • Study Design

Transcriptomics

  • Quality Control
  • Alignment
  • Gene/Transcript Quantification
  • Novel Transcript Identification
  • Differential Gene Expression
  • 10X Single-Cell Cell Ranger
  • 10X Single-Cell Tertiary Analysis With Seurat
  • 10X Single-Cell Trajectory/RNA Velocity Analysis
  • Multimodal 10X Single-Cell (ATAC +Gene Expression)
  • Study Design

Advanced/Custom Solutions

  • R/Shiny Package Development
  • Pipeline Development (NextFlow, Snakemake)
  • Containerization (Docker, Singularity)
  • Web-based Applications
  • Cloud-Computing/Storage